|
|
2P2Idb - The Protein-Protein Interaction
Inhibition Database
|
|
2P2Idb
|
2P2Idb - The Protein-Protein Interaction
Inhibition Database
|
|
3DID
|
3DID - 3D interacting
domains
|
|
3D
|
3D-Interologs
- 3D-Interologs
|
|
AANT
|
AANT - Amino Acid-Nucleotide
Interaction Database
|
|
AARSDB
|
AARSDB -
Aminoacyl-tRNA Synthetase Database
|
|
Abasy Atlas
|
Abasy Atlas - Across-bacteria systems Atlas
|
|
ABCdb
|
ABCdb - Archaea and Bacteria ABC Systems
database
|
|
ABS
|
ABS - Annotated regulatory Binding
Sites
|
|
ACSN
|
ACSN - Atlas of Cancer Signalling Network
|
|
AcypiCyc
|
AcypiCyc - Acyrthosiphon pisum Metabolic
Pathways
|
|
ADAN
|
ADAN - Prediction of protein-protein interaction of modular domains
|
|
AffinDB
|
AffinDB - Affinity database for
protein-ligand complexes
|
|
AgingChart
|
AgingChart -
Aging Chart
|
|
AGRIS
|
AGRIS - Arabidopsis Gene
Regulatory Information Server
|
|
AHD2.0
|
AHD2.0 - Arabidopsis
Hormone Database 2.0
|
|
AllFuse
|
AllFuse - Functional Associations
of Proteins in Complete Genomes
|
|
AlzPathway
|
AlzPathway - A Comprehensive Map
of Signaling Pathways of Alzheimer's Disease
|
|
aMAZE
|
aMAZE - Protein Function and Biochemical
Pathways Project
|
|
ANAP
|
ANAP - Arabidopsis Network Analysis Pipeline
|
|
ANIA
|
ANIA -
ANnotation and Integrated Analysis of the 14-3-3 interactome
|
|
AnimalTFDB
|
AnimalTFDB - Animal Transcription
Factor Database
|
|
AntiJen
|
AntiJen -
AntiJen a Kinetic, Thermodynamic and Cellular Database
|
|
APID
|
APID - Agile Protein
Interactomes DataServer
|
|
Arabidopsis Reactome
|
Arabidopsis Reactome - A curated
knowledgebase of plant biological pathways
|
|
AraCyc
|
AraCyc - Arabidopsis enzymes and
biochemical pathways database
|
|
AraNet
|
AraNet - AraNet: Probabilistic Functional
Gene Network of Arabidopsis Thaliana
|
|
AraPath
|
AraPath - AraPath: a knowledgebase
for pathway analysis in Arabidopsis
|
|
Araport
|
Araport - Arabidopsis
Information Portal
|
|
Argonaute
|
Argonaute -
Gene regulation by mammalian micro-RNAs
|
|
ARN
|
ARN - Adipogenesis Regulation
Network
|
|
ARN
|
ARN - The Autophagy
Regulatory Network
|
|
ArthropodaCyc
|
ArthropodaCyc -
|
|
AS
|
AS-ALPS -
Alternative Splicing - induced ALteration of Protein Structure
|
|
ASC
|
ASC - Active
Sequences Collection
|
|
ASD
|
ASD - Allosteric Database
|
|
ASEdb
|
ASEdb - Alanine Scanning
Energetics Database
|
|
ASPD
|
ASPD -
Artificial Selected Proteins/Peptides Database
|
|
ATDB
|
ATDB -
Animal Toxin Database
|
|
AthaMap
|
AthaMap - AthaMap
|
|
Athena
|
Athena - Athena
|
|
AtIPD
|
AtIPD - Arabidopsis thaliana
Isoprenoid Pathway Database
|
|
AtmiRNET
|
AtmiRNET -
Reconstructing regulatory networks of Arabidopsis thaliana miRNAs
|
|
AtPAN
|
AtPAN - Arabidopsis
thaliana Promoter Analysis Net
|
|
AtPID
|
AtPID -
Arabidopsis thaliana Protein Interactome Database
|
|
AtPIN
|
AtPIN -
Arabidopsis thaliana Protein Interactome Network
|
|
ATRM
|
ATRM - Arabidopsis
Transcriptional Regulatory Map
|
|
AURA
|
AURA - Atlas of UTR
Regulatory Activity
|
|
Bacteriome.org
|
Bacteriome.org -
Bacterial Protein Interaction Database for Escherichia Coli
|
|
BBID
|
BBID - Biological
Biochemical Image Database
|
|
BESC BeoCyc
|
BESC
BeoCyc - BioEnergy Science Center BeoCyc
|
|
BIANA
|
BIANA - Biologic Interaction and Network Analysis
|
|
BID
|
BID - Binding Interface Database
|
|
BiGG Models
|
BiGG Models -
|
|
BIND
|
BIND -
Biomolecular Interaction Network Database
|
|
Binding MOAD
|
Binding MOAD - Binding
Mother of all Databases
|
|
BindingDB
|
BindingDB -
The Binding Database
|
|
BioCarta
|
BioCarta - BioCarta Pathway
Diagrams
|
|
BioCyc
|
BioCyc - BioCyc Knowledge Library
|
|
BioGRID
|
BioGRID - Biological
General Repository for Interaction Datasets
|
|
BioLiP
|
BioLiP - Ligand-Protein
Binding Database
|
|
BiologicalNetworks
|
BiologicalNetworks -
BiologicalNetworks
|
|
BioModels
|
BioModels -
BioModels Database
|
|
Bionemo
|
Bionemo -
Biodegradation Network Molecular Biology Database
|
|
Biopath
|
Biopath -
Biochemical Pathways database
|
|
BioPathway Visualizer
|
BioPathway
Visualizer - Arizona BioPathway Visualizer
|
|
BioPlex
|
BioPlex - Biophysical
Interactions of ORFeome-based Complexes
|
|
BioSilico
|
BioSilico - BioSilico
|
|
Biozon
|
Biozon - Biozon
|
|
BIPA
|
BIPA - Biological
Interaction database for Protein-nucleic Acid
|
|
BISC
|
BISC - BInary SubComplex
Database
|
|
BMPH
|
BMPH - Boehringer
Mannheim Biochemical Pathways Wall Chart
|
|
BRENDA
|
BRENDA - BRaunschweig
ENzyme DAtabase
|
|
BRITE
|
BRITE - Functional
Hierarchies and Binary Relationships of Biological Entities
|
|
BSRD
|
BSRD - Bacterial
Small Regulatory RNA Database
|
|
BsubCyc
|
BsubCyc - BsubCyc
|
|
CA1Neuron
|
CA1Neuron -
Pathways of the hippocampal CA1 neuron
|
|
CADgene
|
CADgene - Coronary
Artery Disease Gene Database
|
|
Cancer Cell Map
|
Cancer Cell Map - The
Cancer Cell Map
|
|
CancerNet
|
CancerNet -
|
|
CancerResource
|
CancerResource -
CancerResource
|
|
canEvolve
|
canEvolve -
|
|
CathaCyc
|
CathaCyc - CathaCyc:
Metabolic Pathway Database of Catharanthus roseus
|
|
CBN
|
CBN - Causal Biological
Networks Database
|
|
CCDB
|
CCDB - The Cell Cycle
Database
|
|
CCSB Interactome Database
|
CCSB Interactome
Database - Center for Cancer Systems Biology Interactome Database
|
|
CellCircuits
|
CellCircuits -
CellCircuits
|
|
CellML Repository
|
CellML Repository -
CellML Model Repository
|
|
CHD@ZJU
|
CHD@ZJU - Coronary
Heart Disease @ZJU Database
|
|
ChEMBLdb
|
ChEMBLdb - ChEMBL
Database
|
|
ChemProt
|
ChemProt -
ChemProt
|
|
ChIPBase
|
ChIPBase -
|
|
CID
|
CID -
CISBAN Cross-Species Interactome Database
|
|
CIDeR
|
CIDeR -
|
|
CircNet
|
CircNet - A Database
of Circular RNAs
|
|
CirGRDB
|
CirGRDB - Circadian gene
and regulators database
|
|
cisRED
|
cisRED - Cis-regulatory element
database
|
|
CLiBE
|
CLiBE -
Computed Ligand Binding Energy
|
|
CMAP
|
CMAP -
Complement Map Database
|
|
CollecTF
|
CollecTF - A
Database of Transcription Factor Binding Sites in the Bacteria Domain
|
|
Colorectal Cancer Atlas
|
Colorectal Cancer Atlas -
|
|
COMPEL
|
COMPEL - Database on
Composite Regulatory Elements
|
|
comPPI
|
comPPI - Compartmentalized
Protein-Protein Interaction Database
|
|
ComSim
|
ComSim - Database of
protein structures in bound (Complex) and unbound (Single) states
|
|
CoopTFD
|
CoopTFD -
Cooperative Transcription Factors Database
|
|
COPE
|
COPE - Cytokines and Cells
Online Pathfinder Encyclopedia
|
|
CornCyc
|
CornCyc - CornCyc
|
|
CORNET
|
CORNET -
CORrelation NETworks
|
|
CORUM
|
CORUM -
Comprehensive resource of mammalian protein complexes
|
|
CoryneRegNet
|
CoryneRegNet
- Database of Corynebacterial Transcription Factors and Regulatory Networks
|
|
CottonGen
|
CottonGen - CottenCyc
Pathways Database
|
|
COXPRESdb
|
COXPRESdb - Coexpressed Gene
Database
|
|
CPDB
|
CPDB - ConsensusPathDB
|
|
CREDO
|
CREDO - CREDO: A
Structural Interactomics Database For Drug Discovery
|
|
CSNDB
|
CSNDB - Cell Signaling
Networks Database
|
|
CSP
|
CSP - Cytokine
Signaling Pathway Database
|
|
CST
|
CST - Cell Signaling Technology Pathway Database
|
|
CTD
|
CTD - Comparative Toxicogenomics
Database
|
|
CTDB
|
CTDB
- Calmodulin Target Database
|
|
CutDB
|
CutDB - CutDB: Proteolytic
Event Database
|
|
Cyclonet
|
Cyclonet -
Cyclonet
|
|
DAnCER
|
DAnCER - Disease Annotated
Chromatin Epigenetics Resource
|
|
DAPID
|
DAPID - Domain
Annotated Protein-protein Interaction Database
|
|
DASMI
|
DASMI - Distributed
Annotation System for Molecular Interactions
|
|
DATF
|
DATF - Database of
Arabidopsis Transcription Factors
|
|
DBD
|
DBD
- DNA-Binding Domain: Transcription Factor Predictor Database
|
|
DB
|
DB-PABP - Database of
Polyanion Binding Proteins
|
|
dbSNO
|
dbSNO - database of
Cysteine S-NitrOsylation
|
|
DBTBS
|
DBTBS - Database of Bacillus
subtilis Promoters and Transcription Factors
|
|
DBTGR
|
DBTGR - DataBase of Tunicate Gene
Regulation
|
|
DC Pathway
|
DC Pathway - Dendritic Cell Signaling Pathway Map
|
|
DCDB
|
DCDB - Drug
Combination Database
|
|
DDIB
|
DDIB -
Database of Domain Interactions and Bindings
|
|
DDRprot
|
DDRprot -
DNA Damage Response proteins database
|
|
DeathDomain
|
DeathDomain - Death Domain
Database
|
|
DEOP
|
DEOP - Dragon
Explorer of Osmoprotection Pathways
|
|
DEPOD
|
DEPOD - the human
DEPhOsphorylation Database
|
|
DGA
|
DGA
- Disease and Gene Annotations
|
|
DGIdb
|
DGIdb - The Drug Gene
Interaction Database
|
|
Digital Development Database
|
Digital Development
Database - Lineage Differentiation and Phenotypes in C. elegans
|
|
DIMA
|
DIMA -
Domain Interaction Map
|
|
DIP
|
DIP -
Database of Interacting Proteins
|
|
DIPOS
|
DIPOS -
Database of Interacting Proteins in Oryza Sativa
|
|
DNAtraffic
|
DNAtraffic - DNAtraffic
Database
|
|
DOMINE
|
DOMINE -
Database of Protein Domain Interactions
|
|
DOMINO
|
DOMINO - Domain
Peptide Interactions Database
|
|
DOMMINO
|
DOMMINO
- Database of MacroMolecular Interactions
|
|
Doodle
|
Doodle - Database of
oligomerization domains from lambda experiments
|
|
DopaNet
|
DopaNet - DopaNet
|
|
DOQCS
|
DOQCS - Database of
Quantitative Cellular Signaling
|
|
DPIDB
|
DPIDB - DNA-Protein
Interaction Database
|
|
DPInteract
|
DPInteract -
DNA-Protein Interactions Database
|
|
DPRP
|
DPRP - A Database of
Phenotype-Specific Regulatory Programs Derived From Transcription Factor
Binding Data
|
|
Dr. PIAS
|
Dr. PIAS - Druggable
Protein-protein Interaction Assessment System
|
|
Drastic
|
Drastic - Database Resource
for Analysis of Signal Transduction In Cells
|
|
DRC
|
DRC
- Database of Ribosomal Crosslinks
|
|
dreamBase
|
dreamBase - dreamBase
|
|
DroID
|
DroID - The Drosophila
Interactions Database
|
|
DroPNet
|
DroPNet -
Drosophila Protein Network
|
|
DRTF
|
DRTF - Database of Rice
Transcription Factors
|
|
drug2gene
|
drug2gene - drug2gene
|
|
DrugBank
|
DrugBank - DrugBank
|
|
DRYGIN
|
DRYGIN - Data
Repository of Yeast Genetic INteractions
|
|
DSM
|
DSM -
Dynamic Signaling Maps
|
|
E3Net
|
E3Net -
|
|
EciD
|
EciD - E. coli
Interaction Database
|
|
ECMDB
|
ECMDB - E. Coli Metabolome
Database
|
|
EcoCyc
|
EcoCyc - Encyclopedia of E. coli
Genes and Metabolism
|
|
ECRbase
|
ECRbase - Evolutionary
conserved region database
|
|
eMIM
|
eMIM -
Electronic Molecular Interaction Map
|
|
EMP
|
EMP - Enzymes and Metabolic
Pathways Database
|
|
EndoNet
|
EndoNet -
EndoNet
|
|
ENZYME
|
ENZYME - Enzyme nomenclature
database
|
|
Enzyme Portal
|
Enzyme Portal - EBI
Enzyme Portal
|
|
EpimiR
|
EpimiR - Curated
Mutual Regulation between Epigenetic Modification and MiRNA
|
|
ERGO
|
ERGO - ERGO Genome
Analysis and Discovery System
|
|
ExPASy Biochemical Pathways
|
ExPASy Biochemical
Pathways - ExPASy - Roche Applied Science Biochemical Pathways
|
|
EXPath
|
EXPath - Comparative
Expression Analysis Inferring Metabolic Pathways for Plants
|
|
Expresso
|
Expresso -
Exploring the Interaction of Transcription Factors and Their Target Genes in
Plants using ChIP-Seq Data
|
|
FIMM
|
FIMM - Functional
Molecular Immunology
|
|
FLIGHT
|
FLIGHT - FLIGHT
|
|
FLOR
|
FLOR-ID -
FLOweRing Interactive Database
|
|
FlyBase
|
FlyBase - FlyBase: a database of
Drosophila Genes & Genomes
|
|
Fly
|
Fly-DPI
- Drosophila melanogaster Database of Protein Interactomes
|
|
FlyFactorSurvey
|
FlyFactorSurvey -
FlyFactorSurvey: Database of Drosophila TF DNA-Binding Specifities
|
|
FlyMine
|
FlyMine - FlyMine
|
|
FlyNets
|
FlyNets
- FlyNets
|
|
FlyOde
|
FlyOde -
|
|
FlyReactome
|
FlyReactome - FlyReactome: a
curated knowledgebase of drosophila melanogaster pathways
|
|
FlyTF
|
FlyTF - The Drosophila
Transcription Factor Database
|
|
FMM
|
FMM - From Metabolite to
Metabolite
|
|
FPPI
|
FPPI - Fussarium
graminearum Protein-Protein Interaction Database
|
|
FunCoup
|
FunCoup - Networks of
Functional Coupling
|
|
FusionDB
|
FusionDB -
Prokaryote Gene Fusion Events
|
|
GDR Cyc Pathways
|
GDR Cyc Pathways -
Genome Database for Rosaceae Cyc Pathways
|
|
GenAge
|
GenAge -
GenAge: The Ageing Gene Database
|
|
Gene3D
|
Gene3D - Gene3D
|
|
GeneGlobe
|
GeneGlobe -
GeneGlobe
|
|
GeneMANIA
|
GeneMANIA - GeneMANIA
|
|
GeneNet
|
GeneNet -
Genetic Networks
|
|
GeneOrienteer
|
GeneOrienteer - Gene
Orienteer
|
|
GenePath
|
GenePath - GenePath
|
|
GeNet
|
GeNet - Gene
Networks Database
|
|
GeneTex
|
GeneTex
- GeneTex
|
|
GenMAPP
|
GenMAPP - Gene MicroArray
Pathway Profiler
|
|
GermOnline
|
GermOnline -
GermOnline
|
|
GLAMM
|
GLAMM -
Genome-Linked Application for Metabolic Maps
|
|
GLIDA
|
GLIDA
- GPCR-Ligand Database
|
|
GO
|
GO - Gene Ontology
Consortium
|
|
GOLD.db
|
GOLD.db - Genomics of
Lipid-associated Disorders
|
|
GON
|
GON
- Genomic Object Net
|
|
GPCR
|
GPCR-PD - G protein-coupled receptors protein database
|
|
gpDB
|
gpDB - A
Database of G-Proteins and their Interaction with GPCRs
|
|
GRAMENE
|
GRAMENE - Plant Metabolic
Pathways
|
|
GraP
|
GraP -
Platform of Functional Genomics Analysis in Gossypium raimondii
|
|
GroEL PPI
|
GroEL
PPI - Proteins that interact with GroEL and factors that affect their release
|
|
GTDB
|
GTDB -
Glycosylation Pathways Database
|
|
Guide to Pharmacology
|
Guide to
Pharmacology - Guide to Pharmacology
|
|
GWIDD
|
GWIDD - Genome-WIde
protein Docking Database
|
|
HAPPI
|
HAPPI -
Human Annotated and Predicted Protein Interactions Database
|
|
HCNet
|
HCNet - Heart and
Calcium Functional Network Database
|
|
HCPIN
|
HCPIN - Human Cancer
Protein Interaction Network
|
|
HCVpro
|
HCVpro - Hepatitus C
Virus Protein Interaction Database
|
|
HDBase
|
HDBase - Huntington's Disease Base
|
|
HDNetDB
|
HDNetDB - Huntington's
Disease Network DataBase
|
|
HDR
|
HDR -
Homeodomain Resource Database
|
|
Hedgehog
|
Hedgehog - Hedgehog
Signaling Pathway Database
|
|
HemoPDB
|
HemoPDB
- Hematopoiesis Promoter Database
|
|
Het
|
Het-PDB_Navi
- Het-PDB Navi
|
|
HiMAP
|
HiMAP - Human Interactome Map
|
|
HINT
|
HINT - High-quality
Interactomes
|
|
HINT
|
HINT-KB - Human
INTeractome Knowledge Base
|
|
H
|
H-InvDB - H-InvDB:
Annotated Human Gene Database
|
|
hiPathDB
|
hiPathDB - human
integrated Pathway DB with facile visualization
|
|
HIPPIE
|
HIPPIE
- Human Integrated Protein-Protein Interaction rEference
|
|
HitPredict
|
HitPredict - HitPredict
|
|
HIV Proteome
|
HIV
Proteome - HIV Proteome
|
|
HIV
|
HIV-1 at NCBI - HIV-1, Human Protein Interaction Database at
NCBI
|
|
HIVMID
|
HIVMID -
HIV Molecular Immunology Database
|
|
HMDB
|
HMDB - Human Metabolome Database
|
|
HomoMINT
|
HomoMINT
- Human Molecular Interaction Database
|
|
HoPaCI
|
HoPaCI-db -
Host-Pseudomonas and Coxiella Interaction DataBase
|
|
HotRegion
|
HotRegion - A
Database of Cooperative Hotspots
|
|
HotSprint
|
HotSprint -
Database of Computational Hot Spots of Protein Interfaces
|
|
HoxPro
|
HoxPro - HOX Pro
|
|
HPD
|
HPD - Human
Pathway Database
|
|
hPDI
|
hPDI - Human
Protein-DNA Interactome
|
|
HP
|
HP-DPI - Helicobacter pylori
Database of Protein Interactomes
|
|
HPID
|
HPID
- Human Protein Interaction Database
|
|
HPIDB
|
HPIDB -
Host-Pathogen Interaction Database
|
|
HPRD
|
HPRD - Human Protein Reference
Database
|
|
HRGRN
|
HRGRN - HRGRN
|
|
HRTBLDb
|
HRTBLDb - Hormone
Receptor Target Binding Loci Database
|
|
HSV1 PPI
|
HSV1
PPI - Protein-Protein Interactions Table for Human herpesvirus 1
|
|
HTPSELEX
|
HTPSELEX - HTPSELEX
|
|
HTRIdb
|
HTRIdb - Human
Transcriptional Regulation Interaction Database
|
|
Human Proteinpedia
|
Human Proteinpedia -
Human Proteinpedia
|
|
HumanCyc
|
HumanCyc - Encyclopedia of Homo
sapiens genes and metabolism
|
|
Human
|
Human-gpDB
- A database of human GPCRs, G-proteins, Effectors and their interactions
|
|
HumanMine
|
HumanMine
-
|
|
HumanPSD
|
HumanPSD - Human
Proteome Survey Database
|
|
HuPI
|
HuPI - database of the
Human Proteotheque Initiative
|
|
HuRI
|
HuRI - The Human
Reference Protein Interactome Mapping Project
|
|
I2D
|
I2D - Interologous
Interaction Database
|
|
IBIS
|
IBIS
- Inferred Biomolecular Interactions Server
|
|
ICBS
|
ICBS - Inter-Chain
Beta-Sheets
|
|
IDEAL
|
IDEAL
- Intrinsically Disordered proteins with Extensive Annotations and Literature
|
|
iHOP
|
iHOP -
Information Hyperlinked Over Proteins
|
|
IID
|
IID
- Integrated Interactions Database
|
|
IIIDB
|
IIIDB -
Isoform-Isoform Interaction Database
|
|
IMEx
|
IMEx - The
International Molecular Exchange Consortium
|
|
IMG
|
IMG -
Integrated Microbial Genomes
|
|
IMID
|
IMID - Integrated Molecular
Interaction Database
|
|
iMOTdb
|
iMOTdb - Interacting
motifs in proteins database
|
|
IMP
|
IMP - Integrative
Multi-species Prediction
|
|
InBase
|
InBase - The Intein Database
|
|
Indigo
|
Indigo - Gene
Neighborhoods and Codon Usage
|
|
InnateDB
|
InnateDB - A Knowledge
Resource for Innate Immunity Interactions and Pathways
|
|
INOH
|
INOH - Integrating Network
Objects with Hierarchies
|
|
InsectBase
|
InsectBase - Integrated
Genome and Transcriptome Resources for Insects
|
|
INstruct
|
INstruct - a database of 3D
protein interactome networks with structural resolution
|
|
IntAct
|
IntAct - IntAct Molecular
Interaction Database
|
|
IntEnz
|
IntEnz -
Integrated relational Enzyme database
|
|
INTERACT
|
INTERACT -
INTERACT Protein-protein interaction database
|
|
Interactome
|
Interactome - Krogan
Lab Interactome Database
|
|
InterDom
|
InterDom - Database
of Interacting Domains
|
|
InterEvol
|
InterEvol - InterEvol
|
|
Interfaces
|
Interfaces - DATASET OF PROTEIN-PROTEIN INTERFACES
|
|
InterMitoBase
|
InterMitoBase
- InterMitoBase
|
|
Interolog
|
Interolog -
Interolog/Regulog Database
|
|
InteroPorc
|
InteroPorc
- Automatic molecular interaction predictions
|
|
InterPare
|
InterPare -
The Protein Interfaceome Database
|
|
InterPreTS
|
InterPreTS
- Interaction Prediction through Tertiary Structure
|
|
IntNetDB
|
IntNetDB -
Integrated Protein Interaction Network Database
|
|
IntPath
|
IntPath - Integrated Pathway Gene Relationship Database
|
|
IPAD
|
IPAD - the Integrated
Pathway Analysis Database for Systematic Enrichment Analysis
|
|
iPath
|
iPath - interactive Pathways
Explorer
|
|
iPAVS
|
iPAVS - Integrated Pathway
Resources, Analysis and Visualization System
|
|
iPfam
|
iPfam - Protein families database of
alignments and HMMs
|
|
iPPI
|
iPPI-DB - Inhibitors of
Protein-Protein Interaction Database
|
|
iProClass
|
iProClass
- iProClass
|
|
iRefIndex
|
iRefIndex
- Interaction Reference Index
|
|
iRefWeb
|
iRefWeb - Interaction
Reference Index Web Interface
|
|
IRView
|
IRView - IRView
|
|
ITFP
|
ITFP - Intergrated
Transcription Factor Platform
|
|
IUPHAR
|
IUPHAR-DB - The
International Union of Basic and Clinical Pharmacology Database
|
|
JAIL
|
JAIL - JAIL
|
|
JASPAR
|
JASPAR - JASPAR
Transcription Factor Binding Profile Database
|
|
JET2 Viewer
|
JET2
Viewer -
|
|
JWS Online
|
JWS Online - Online Cellular
Systems Modelling
|
|
KaPPA
|
KaPPA-View - Kazusa
Plant Pathway Viewer
|
|
KBDOCK
|
KBDOCK - A Resource for
Knowledge-Based Protein Docking
|
|
KDBI
|
KDBI
- Kinetic Data of Bio-molecular Interactions database
|
|
KEGG
|
KEGG - Kyoto Encyclopedia
of Genes and Genomes
|
|
KiBank
|
KiBank - KiBank
|
|
KIDFamMap
|
KIDFamMap -
Kinase-Inhibitor-Disease Family Map
|
|
KinaseDB
|
KinaseDB -
Kinase Pathway Database
|
|
KLIFS
|
KLIFS - Kinase-Ligand
Interaction Fingerprints and Structures database
|
|
KMIM
|
KMIM -
Kohn Molecular Interaction Maps
|
|
KNIFE
|
KNIFE -
Drosophila pattern formation knowledge base
|
|
kPath
|
kPath -
|
|
KUPS
|
KUPS - The
University of Kansas Proteomics Service
|
|
LAMP
|
LAMP - (Liverpool) Library of
Apicomplexan Metabolic Pathways
|
|
LIGAND
|
LIGAND - Molecular
building blocks of life in the chemical space
|
|
Ligand Expo
|
Ligand Expo - Ligand
Expo
|
|
LigASite
|
LigASite - Ligand Attachment Site
|
|
LIPID MAPS
|
LIPID MAPS - LIPID
Metabolites and Pathways Strategy
|
|
LMPID
|
LMPID -
Linear Motif mediated Protein-Protein Interaction Database
|
|
LncBase
|
LncBase -
|
|
LncReg
|
LncReg -
database for LncRNA regulatory networks
|
|
lncRInter
|
lncRInter -
Database of long non-coding RNA interaction
|
|
LncRNA2Target
|
LncRNA2Target - The
lncRNA Target Gene Database
|
|
LncRNADisease
|
LncRNADisease - The
LncRNA and Disease Database
|
|
lncRNASNP
|
lncRNASNP -
A Database of Single Nucleotide Polymorphisms in long non-coding RNAs
|
|
LSPD
|
LSPD - The Liver Specific
Gene Promoter Database
|
|
MACPAK
|
MACPAK - Simulatable
Macrophage Pathway Knowledgebase
|
|
Macrophages.com
|
Macrophages.com - The
Macrophage Community Website
|
|
MaizeCyc
|
MaizeCyc - MaizeCyc:
metabolic pathways in maize
|
|
MAPPER
|
MAPPER -
Multi-genome Analysis of Positions and Patterns of Elements of Regulation
|
|
MATADOR
|
MATADOR - Manually Annotated
Targets and Drugs Online Resource
|
|
MatrixDB
|
MatrixDB -
Extracellular Matrix Interactions Database
|
|
MDB
|
MDB - Metalloprotein
Database
|
|
MedGene
|
MedGene -
MedGene
|
|
MedicCyc 2.0
|
MedicCyc 2.0 - Medicago
truncatula Pathway Database
|
|
MEMOSys
|
MEMOSys
- MEtabolic MOdel System
|
|
MeRNA
|
MeRNA - Metals in RNA
|
|
MEROPS
|
MEROPS - MEROPS Peptidase
Database
|
|
MetaCore
|
MetaCore -
MetaCore pathway database
|
|
MetaCrop
|
MetaCrop - MetaCrop
|
|
MetaCyc
|
MetaCyc - Metabolic Pathway
Database
|
|
MetaDrug
|
MetaDrug - MetaDrug
|
|
MetaNetX
|
MetaNetX - Automated Model
Construction and Genome Annotation for Large-Scale Metabolic Networks
|
|
metaTIGER
|
metaTIGER
- metaTIGER: metabolic gene evolution resource
|
|
MetExplore
|
MetExplore
-
|
|
MetNetDB
|
MetNetDB
- Metabolic Network Exchange
|
|
Metrabase
|
Metrabase -
Metabolism and Transport Database
|
|
MHCPEP
|
MHCPEP - Database of
MHC binding peptides
|
|
MiasDB
|
MiasDB -
|
|
microPIR
|
microPIR -
microRNA-promoter interactions resource
|
|
microrna.org
|
microrna.org
- Microrna.org target database
|
|
Millipore Pathways
|
Millipore
Pathways - Your online source for visualizing metabolic and signaling
pathways
|
|
MiMI
|
MiMI -
Michigan Molecular Interactions
|
|
MINT
|
MINT - Molecular
Interaction Database
|
|
MIPS CYGD
|
MIPS
CYGD - MIPS Comprehensive Yeast Genome Database
|
|
MIPS MPact
|
MIPS
MPact - Protein Interaction and Complex Database
|
|
MIPS
|
MIPS-MPPI
- MIPS Mammalian Protein-Protein Interaction Database
|
|
miRBase
|
miRBase - microRNA
Database
|
|
miRecords
|
miRecords -
miRecords
|
|
miRIAD
|
miRIAD -
intragenic microRNA database
|
|
miRNAMap
|
miRNAMap - MicroRNA
Map
|
|
miRror
|
miRror-Suite - A
Dual View on Sets of microRNAs and their Targets
|
|
miRTarBase
|
miRTarBase - The
Experimentally Validated microRNA-target Interactions Database
|
|
MiST2
|
MiST2 - Microbial Signal
Transduction Database
|
|
MitoInteractome
|
MitoInteractome -
Mitochondrial Protein Interactome Database
|
|
MitoP2
|
MitoP2 -
Mitochondrial Proteome
|
|
MitoProteome
|
MitoProteome - Human
Mitochondrial Protein Database
|
|
MMDB
|
MMDB - Molecular Modeling Database
|
|
MMMDB
|
MMMDB - Mouse Multiple
tissue Metabolome DataBase
|
|
MnM
|
MnM -
Minimotif Miner
|
|
MobiDB
|
MobiDB - a database of
protein disorder and mobility annotations
|
|
ModBase
|
ModBase
- ModBase
|
|
MODOMICS
|
MODOMICS - Modomics: a
database of RNA modification pathways
|
|
Monod
|
Monod - Modeler's Notebook
and Datastore
|
|
MotifMap
|
MotifMap - MotifMap
|
|
Mouse IDGenes
|
Mouse
IDGenes - Gene interactions in the developing mouse brain
|
|
MouseCyc
|
MouseCyc - Mouse Pathway
Database
|
|
MouseNetV2
|
MouseNetV2 -
Probabilistic Functional Gene Network for Laboratory Mouse, Mus musculus
|
|
MPB
|
MPB - Metabolic Pathways of
Biochemistry
|
|
MPID
|
MPID - Magnaporthe grisea Protein-protein Interaction
Database
|
|
MPIDB
|
MPIDB - Microbial
Protein Interaction Database
|
|
MPID
|
MPID-T
- MHC-Peptide Interaction Database
|
|
MPID
|
MPID-T2 - MHC-Peptide
Interaction Database-TR
|
|
MPI
|
MPI-LIT - The Microbial Protein Interaction Database
|
|
MPMP
|
MPMP - Malaria Parasite
Metabolic Pathways
|
|
MppDB
|
MppDB - Mouse
Protein-Protein Interaction Database
|
|
MPromDb
|
MPromDb - Mammalian
Promoter Database
|
|
MRAD
|
MRAD - Metabolic
Reaction Analysis Database
|
|
mutLBSgeneDB
|
mutLBSgeneDB -
mutated Ligand Binding Site gene DataBase
|
|
mVOC
|
mVOC -
Microbial Volatile Organic Compound Database
|
|
MYCbase
|
MYCbase
- A Database of MYC
|
|
MycoPathPD
|
MycoPathPD - Human Fungal Pathogens Proteome Database
|
|
MycoRegNet
|
MycoRegNet
- Mycobacterial transcription factors and regulatory networks
|
|
myGRN
|
myGRN -
my Genetic Regulatory Network
|
|
NBDB
|
NBDB - Nucleotide
Binding DataBase
|
|
NCBI BioSystems
|
NCBI BioSystems
- NCBI BioSystems
|
|
NCG
|
NCG - Network of Cancer Genes
|
|
NCPI
|
NCPI - Neurospora
Crassa Protein Interactome Database
|
|
NDEx Public Server
|
NDEx Public Server - The
Network Data Exchange Public Server
|
|
Negatome
|
Negatome
- The Negatome Database
|
|
Nematode.net
|
Nematode.net -
Nematode.net
|
|
NetBiochem
|
NetBiochem
- Medical Biochemistry Resource
|
|
NetPath
|
NetPath - NetPath: Signal
Transduction Pathways
|
|
NetPro
|
NetPro
- Molecular Connections Database of Protein Interactions
|
|
NetSlim
|
NetSlim - NetSlim
|
|
NetworKIN
|
NetworKIN - NetworKIN
|
|
NetwoRx
|
NetwoRx -
|
|
NeXO
|
NeXO - The Network Extracted
Ontology
|
|
Nicholson Minimaps
|
Nicholson Minimaps -
IUBMB-Nicholson Metabolic Maps, Minimaps & Animaps
|
|
NLDB
|
NLDB - Natural Ligand
Database
|
|
NPIDB
|
NPIDB - Nucleic
Acid-Protein Interaction Database
|
|
NPInter
|
NPInter -
Noncoding RNAs and protein related biomacromolecules interaction database
|
|
NRF2ome
|
NRF2ome - Integrated regulatory
network of Nuclear Factor (erythroid-derived 2)-like 2 (NRF2)
|
|
NRR
|
NRR - Nuclear Receptor Resource
|
|
NURSA
|
NURSA - Nuclear
Receptor Signaling Atlas
|
|
OmniPath
|
OmniPath - OmniPath
|
|
OnTheFly
|
OnTheFly - A
Database of Drosophila melanogaster Transcription Factors and their Binding
Sites
|
|
Ontocancro
|
Ontocancro - Ontocancro
|
|
ooTFD
|
ooTFD - Object Oriented
Transcription Factors Database
|
|
ORDB
|
ORDB - Olfactory
Receptor Database
|
|
ORTI
|
ORTI - Open-access
Repository of Transcriptional Interaction
|
|
P2TF
|
P2TF - Predicted Prokaryotic
Transcription Factors
|
|
PAGED
|
PAGED - Pathway and Gene Enrichment Database
|
|
PAIR
|
PAIR - The Predicted
Arabidopsis Interactome Resource
|
|
PANTHER
|
PANTHER - Protein ANalysis
THrough Evolutionary Relationships
|
|
PathArt
|
PathArt - Pathway Articulator
|
|
Pathcalling
|
Pathcalling - Curagen
Pathcalling
|
|
PathCards
|
PathCards - Pathway
Unification Database
|
|
PathCase
|
PathCase - CASE
Pathways Database System
|
|
PathDB
|
PathDB - Pathways Database
|
|
pathDIP
|
pathDIP - Pathway
Data Integration Portal
|
|
PathFinder
|
PathFinder - Cell Signaling Pathways
|
|
PathoPlant
|
PathoPlant - PathoPlant
|
|
Pathway Slides
|
Pathway Slides - Cell Signaling Pathway Slides & Charts
|
|
Pathway Studio
|
Pathway Studio - Pathway Studio
|
|
Pathways Knowledge Base
|
Pathways Knowledge Base - Ingenuity Pathways Knowledge Base
|
|
PATIKA
|
PATIKA - Pathway Analysis Tool
for Integration and Knowledge Acquisition
|
|
PATRIC
|
PATRIC - PathoSystems
Resource Integration Center
|
|
PAZAR
|
PAZAR - A Public Database of
Transcription Factor and Regulatory Sequence Annotation
|
|
PC
|
PC - Pathway Commons
|
|
PCDB
|
PCDB - Protein
Conformational Database
|
|
PCOSKB
|
PCOSKB - PolyCystic
Ovary Syndrome KnowledgeBase
|
|
PCPPI
|
PCPPI - Penicillium-Crop
Protein-Protein Interactions database
|
|
PCRPi
|
PCRPi-DB - Presaging Critical Residues in Protein
interfaces-DataBase
|
|
PDBbind
|
PDBbind - PDBbind
|
|
PDBeMotif
|
PDBeMotif -
Protein Data Bank in Europe, Motifs and Sites
|
|
PDB
|
PDB-Ligand -
PDB-Ligand
|
|
PDBsum
|
PDBsum - PDBsum: pictorial database of 3D structures in the
Protein Data Bank
|
|
PDS
|
PDS - Pathways
Database System
|
|
PDSP Ki Database
|
PDSP Ki
Database - Psychoactive Drug Screening Program Ki Database
|
|
PDTD
|
PDTD - Potential Drug
Target Database
|
|
PDZBase
|
PDZBase - PDZ
domain protein-protein interaction database
|
|
PepBank
|
PepBank - PepBank
Peptide Database
|
|
PepCyber
|
PepCyber - PepCyber:
P~Pep
|
|
PepX
|
PepX -
Peptide compleXes
|
|
PeroxisomeDB
|
PeroxisomeDB -
Peroxisome Database
|
|
PharmGKB
|
PharmGKB - The
Pharmacogenetics and Pharmacogenomics Knowledge Base
|
|
phiSITE
|
phiSITE - phiSITE:
Database of Gene Regulation in Bacteriophages
|
|
Phospho.ELM
|
Phospho.ELM -
Post-translational phosphorylation database
|
|
PhosphoBase
|
PhosphoBase - Database of
phosphorylation sites
|
|
PhosphoGRID
|
PhosphoGRID - PhosphoGRID
|
|
PhosphoNetworks
|
PhosphoNetworks -
PhosphoNetworks
|
|
PhosphoPOINT
|
PhosphoPOINT -
PhosphoPOINT
|
|
PhosphoSite
|
PhosphoSite
- Cell Signaling Technology's PhosphoSite Database
|
|
PI2PE
|
PI2PE - Protein
Interface/Interior Prediction Engine
|
|
PIBASE
|
PIBASE - PIBASE
|
|
PICCOLO
|
PICCOLO - PICCOLO
|
|
Pickle
|
Pickle - Protein InteraCtion
KnowLedgebasE
|
|
PID
|
PID - NCI-Nature Pathway
Interaction Database
|
|
PIG
|
PIG
- Host Pathogen Interactions
|
|
Pigment Cell Gene Resource
|
Pigment
Cell Gene Resource - Pigment Cell Gene Resource
|
|
PIMADb
|
PIMADb - Database of
Protein-Protein Interactions in Macromolecular Assemblies
|
|
PIMRider
|
PIMRider - Protein
Interaction Map - Hybrigenics
|
|
PINA
|
PINA - Protein
Interaction Network Analysis
|
|
PINdb
|
PINdb - Proteins Interacting in
the Nucleus database
|
|
PINT
|
PINT -
Protein-protein Interactions Thermodynamic Database
|
|
PIPs
|
PIPs - Human
Protein-Protein Interaction Prediction
|
|
PiSITE
|
PiSITE - Database of Protein
Interaction SITEs
|
|
Plant Reactome
|
Plant Reactome - Plant Reactome Pathway
Database
|
|
PlantCARE
|
PlantCARE -
Plant Cis-Acing Regulatory Elements
|
|
PlantCyc
|
PlantCyc - Plant Metabolic Pathway Databases
|
|
PlantPAN
|
PlantPAN - Plant Promoter Analysis Navigator
|
|
PlantTFDB
|
PlantTFDB - Plant Transcription Factor
Database
|
|
PlasmoDB
|
PlasmoDB - Plasmodium Genomics
Resource
|
|
PLATINUM
|
PLATINUM - Protein-Ligand Affinity
Change Upon Mutation Database
|
|
PLD
|
PLD - Protein
Ligand Database
|
|
PLI
|
PLI -
Protein-Ligand Interaction
|
|
PLIC
|
PLIC - Protein-Ligand Interaction
Clusters
|
|
PlnTFDB
|
PlnTFDB - Plant Transcription
Factor Database
|
|
PMAP
|
PMAP - The
Proteolysis Map
|
|
PMP
|
PMP - The Protein Model Portal
|
|
Pocketome
|
Pocketome - Pocketome
|
|
POINT
|
POINT -
Prediction of Interactome
|
|
PolymiRTS DB
|
PolymiRTS DB - Polymorphism in microRNAs and
their TargetSites
|
|
PombePD
|
PombePD - Schizosaccharomyces pombe Proteome Database
|
|
PoplarGene
|
PoplarGene
-
|
|
PoSSuM
|
PoSSuM - Pocket
Similarity Search using Multi-Sketches
|
|
POSTAR
|
POSTAR - a
platform of POST-trAnscriptional Regulation
|
|
PPID
|
PPID -
Protein-Protein Interaction Database
|
|
PPIRA
|
PPIRA -
Protein-Protein Interactions between Ralstonia solanacearum and Arabidopsis
thaliana
|
|
PPISearch
|
PPISearch -
Protein-Protein Interaction Search
|
|
PPIV (FANTOM)
|
PPIV (FANTOM) -
RIKEN FANTOM Protein Protein Interaction Viewer
|
|
PQS
|
PQS - Protein
Quaternary Structure database
|
|
PRD
|
PRD - Protein-RNA Interaction
Database
|
|
Precise
|
Precise - Predicted and
Consensus Interaction Sites in Enzymes
|
|
Predictive Networks
|
Predictive
Networks - Predictive Networks
|
|
Predictome
|
Predictome - Predictome
|
|
prePPI
|
prePPI - prePPI
|
|
PRID
|
PRID -
Protein-RNA Interaction Database
|
|
PRIDB
|
PRIDB - Protein-RNA
Interface Database
|
|
PRIME
|
PRIME -
Protein interaction and molecular information database
|
|
PRIMOS
|
PRIMOS - Protein
Interaction and Molecule Search database
|
|
PRIN
|
PRIN - Predicted Rice
Interactome Database
|
|
PRISM
|
PRISM - Protein
Interactions by Structural Matching
|
|
ProcessDB
|
ProcessDB
- ProcessDB
|
|
ProChart
|
ProChart
- ProChart database of signal transduction pathway information
|
|
PRODORIC
|
PRODORIC - Prokaryotic
database of gene regulation
|
|
PRODORIC2
|
PRODORIC2 - DNA binding sites
for prokaryotic transcription factors
|
|
PROFESS
|
PROFESS - Protein
Function, Evolution, Structure and Sequence Database
|
|
Prolinks
|
Prolinks - Prolinks
|
|
ProMesh
|
ProMesh - ProMesh
Protein-Protein Interaction Database
|
|
PROMISCUOUS
|
PROMISCUOUS
- PROMISCUOUS
|
|
ProNet
|
ProNet - Protein-protein
Interaction Database
|
|
ProNIT
|
ProNIT -
Thermodynamic Database for Protein-Nucleic Acid Interactions
|
|
ProtChemSI
|
ProtChemSI - ProtChemSI:
the database of protein-chemical structural interactions
|
|
ProtCID
|
ProtCID - PROTein
Common Interfaces Database
|
|
PROTCOM
|
PROTCOM -
Database of Protein Complexes
|
|
Protein Lounge
|
Protein Lounge - Protein
Lounge
|
|
Proteome
|
Proteome
-
|
|
PRRDB
|
PRRDB - Pattern
Recognition Receptor Database
|
|
PseudoCyc
|
PseudoCyc - A
Database of Metabolic Pathways in Pseudomonas aeruginosa PAO1
|
|
PSIbase
|
PSIbase - Protein
Structural Interactome Database
|
|
PSICQUIC
|
PSICQUIC - Proteomics Standards Initiative Common QUery
InterfaCe
|
|
PSMDB
|
PSMDB - Protein /
Small-molecule database
|
|
PSP
|
PSP - Polygenic
signaling pathways
|
|
pSTIING
|
pSTIING - Protein,
Signalling, Transcriptional Interactions & Inflammation Networks Gateway
|
|
PTIR
|
PTIR - Predicted Tomato
Interactome Resource
|
|
PTMcode
|
PTMcode - PTMcode 2
|
|
PTM
|
PTM-Switchboard
- Post-Translational Modification-Switchboard
|
|
PubAngioGen
|
PubAngioGen - Public
AngioGenesis research portal
|
|
PubGene
|
PubGene -
PubGene
|
|
PUMA2
|
PUMA2 - Evolutionary
Analysis of Metabolism
|
|
PutidaNET
|
PutidaNET -
PutidaNET
|
|
RAID v2
|
RAID v2 - RNA
Association Interaction Database
|
|
RAPID
|
RAPID - Resource of
Asian Primary Immunodeficiency Diseases
|
|
RBP
|
RBP-Var -
|
|
RCSB PDB
|
RCSB PDB - The
Research Collaboratory for Structural Bioinformatics Protein Data Bank
|
|
Reactome
|
Reactome - Reactome
KnowledgeBase
|
|
REBASE
|
REBASE -
Restriction Enzyme Database
|
|
REDfly
|
REDfly - Regulatory
Element Database for Drosophila
|
|
RegNetwork
|
RegNetwork - Regulatory
Network Repository
|
|
RegPhos
|
RegPhos - Regulatory
Network in Protein Phosphorylation
|
|
RegPrecise
|
RegPrecise -
RegPrecise: Collection of Manually Curated Inferences of Regulons in
Prokaryotic Genomes
|
|
RegTransBase
|
RegTransBase
- RegTransBase
|
|
RegulonDB
|
RegulonDB - Database on
Transcriptional Regulation and Genome Organization
|
|
Relibase
|
Relibase - Protein-ligand database query tool
|
|
REPAIRtoire
|
REPAIRtoire -
REPAIRtoire: a database of DNA repair pathways
|
|
RGD
|
RGD
- Rat Genome Database pathway resource
|
|
Rhea
|
Rhea - Reaction database
|
|
RiceCyc
|
RiceCyc
- The rice metabolic pathway database
|
|
RiceGeneThresher
|
RiceGeneThresher -
RiceGeneThresher: bioinformatics tool site for rice genes discovery
|
|
RiceSRTFDB
|
RiceSRTFDB -
The Rice Stress-Responsive Transcription Factor Database
|
|
RKD
|
RKD - Rice
Kinase Database
|
|
RNA Bricks 2
|
RNA Bricks 2 -
|
|
RNApathwaysDB
|
RNApathwaysDB
- RNA Pathways Database: a database of RNA maturation and decay
|
|
ROSPath
|
ROSPath - Reactive Oxygen
Species related Signaling Pathway
|
|
RsiteDB
|
RsiteDB - RNA
binding sites data base
|
|
rSNP Guide
|
rSNP
Guide - rSNP Guide
|
|
S/MARt_DB
|
S/MARt_DB
- The S/MAR transaction DataBase
|
|
SABIO
|
SABIO-RK - SABIO-Reaction
Kinetics Database
|
|
SBML Model Repository
|
SBML Model Repository - SBML
Model Repository
|
|
Scansite
|
Scansite - Scansite
|
|
ScerTF
|
ScerTF - ScerTF
|
|
SCOPEC
|
SCOPEC - Database of protein
catalytic domains
|
|
SCOPPI
|
SCOPPI
- Structural classification of protein-protein interfaces
|
|
SCOWLP
|
SCOWLP -
structural classification of protein binding reasons for atomic comparative
analysis of protein interactions
|
|
SCPD
|
SCPD - The Promoter
Database of Saccharomyces cerevisiae
|
|
sc
|
sc-PDB - An
Annotated Database of Druggable Binding Sites from the Protein DataBank
|
|
SELEX_DB
|
SELEX_DB
- Randomized DNA/RNA sequence database
|
|
Sentra
|
Sentra - Sentra
Signal Transduction Database
|
|
SGD Pathway Tools
|
SGD Pathway Tools -
Saccharomyces Genome Database Pathway Tools
|
|
SGN
|
SGN - Sol Genomics Network
|
|
SIGMA
|
SIGMA-ALDRICH - Cell Signalling Pathway Slides & Charts
|
|
SignaFish
|
SignaFish -
|
|
Signaling Gateway
|
Signaling
Gateway - UCSD-Nature Signaling Gateway Molecule Pages
|
|
SignaLink 2
|
SignaLink 2 - SignaLink 2: a
multi-layered signaling pathway resource
|
|
SIGNOR
|
SIGNOR - The SIGnaling
Network Open Resource
|
|
SigPath
|
SigPath
- Signaling Pathway Information System
|
|
SIMAP
|
SIMAP
- The Similarity Matrix of Proteins
|
|
SMPDB
|
SMPDB - Small Molecule Pathway
Database
|
|
Snap
|
Snap - a Single
Nucleotide Polymorphism Annotation Platform
|
|
SNAPPI
|
SNAPPI-DB -
Structures, iNterfaces and Alignments for Protein-Protein Interactions
|
|
SomamiR DB
|
SomamiR DB - Somatic
mutations altering microRNA-ceRNA interactions
|
|
SoyBase
|
SoyBase - USDA-ARS Soybean
Genetics and Genome Database
|
|
SoyFN
|
SoyFN - Soybean
Functional Network
|
|
SPAD
|
SPAD - Signaling
Pathway Database
|
|
SPiD
|
SPiD - Subtilis Protein interaction Database
|
|
SPIDer
|
SPIDer -
Saccharomyces Protein-protein Interaction Database
|
|
SPIKE
|
SPIKE - Signaling
Pathway Integrated Knowledge Engine
|
|
SPIN
|
SPIN-PP
- Surface Properties of Interfaces - Protein-Protein Interfaces
|
|
SpliceAid
|
SpliceAid-F
- A Database of Human Splicing Factors and their Binding Sites
|
|
Spliceosome Database
|
Spliceosome Database -
|
|
SPLINTER
|
SPLINTER - Structural Protein-Ligand Interactome
|
|
Sporeweb
|
Sporeweb -
|
|
SPPS
|
SPPS - Sequence-based Protein Partner Search
|
|
sRNAMap
|
sRNAMap - Small
noncoding RNA Map
|
|
sRNATarBase
|
sRNATarBase -
sRNA-Target Interactions in Bacteria
|
|
starBase
|
starBase -
|
|
STCDB
|
STCDB
- Signal Transduction Classification Database
|
|
STIFDB
|
STIFDB - Stress
Responsive Transcription Factor Database
|
|
STITCH
|
STITCH - Chemical-Protein
Interaction Networks
|
|
STKE
|
STKE - Signal
Transduction Knowledge Environment
|
|
STRING
|
STRING - Search Tool for the
Retrieval of Interacting Genes/Proteins
|
|
Struct2Net
|
Struct2Net
- Structure-based Computational Predictions of Protein-Protein Interactions
|
|
SUBA4
|
SUBA4 - The SUBcellular localization
database for Arabidopsis proteins
|
|
SubtiPathways
|
SubtiPathways
- SubtiPathways
|
|
SuperCYP
|
SuperCYP -
SuperCYP, Cytochrome P450 Database
|
|
SuperSite
|
SuperSite -
SuperSite
|
|
SuperTarget
|
SuperTarget
- SuperTarget
|
|
SwissLipids
|
SwissLipids - A
Knowledge Resource for Lipids and their Biology
|
|
SYFPEITHI
|
SYFPEITHI - Database of MHC
Ligands and Peptide Motifs
|
|
SYNDB
|
SYNDB -
Synapse Database
|
|
SynechoNET
|
SynechoNET -
SynechoNet: Integrated Protein-Protein Interaction Database of Synechocystis
sp. PCC 6803
|
|
SynLethDB
|
SynLethDB -
Synthetic Lethality Database
|
|
SynSysNet
|
SynSysNet
- Synaptic Proteins Database
|
|
SysPTM
|
SysPTM - A
Systematic Resource for Post-Translational Modification
|
|
SYSTOMONAS
|
SYSTOMONAS -
SYSTems biology of pseudOMONAS
|
|
T1DBase
|
T1DBase - Type 1 Diabetes Database
|
|
T2D
|
T2D-Db - T2D-Db: An
Integrated Data Resource on Type 2 Diabetes
|
|
T3DB
|
T3DB - Toxin and Toxin-Target
Database
|
|
Tabloid Proteome
|
Tabloid
Proteome - Tabloid Proteome
|
|
TAIR
|
TAIR - The Arabidopsis
Information Resource
|
|
TarBase
|
TarBase - TarBase
|
|
TCDB
|
TCDB - Transporter Classification
Database
|
|
TcoF
|
TcoF-DB -
Database of Transcription co-factors and transcription factor interactions
|
|
TDR Targets Database
|
TDR Targets Database - The
Tropical Disease Research Targets Database
|
|
TECR
|
TECR - Thermodynamics
of Enzyme-Catalyzed Reactions
|
|
TeloPIN
|
TeloPIN -
Telomeric Proteins Interaction Network
|
|
TetraFGD
|
TetraFGD - Tetrahymena
Functional Genomics Database
|
|
TFClass
|
TFClass
- Classification of Human Transcription Factors and Mouse Orthologs
|
|
TFe
|
TFe -
Transcription Factor encyclopedia
|
|
TFinDit
|
TFinDit -
Transcription Factor-DNA Interaction Data Depository
|
|
TGDB
|
TGDB - Tumor Gene
Database
|
|
The Network Portal
|
The Network Portal
-
|
|
The SEED
|
The SEED -
|
|
TissueNet
|
TissueNet - The
Database of Human Tissue Protein-Protein Interactions
|
|
TPDB
|
TPDB - Target Protein
Database
|
|
TRACTOR_DB
|
TRACTOR_DB - TRACTOR_DB
|
|
TRANSFAC
|
TRANSFAC - Transcription
Factor Database
|
|
Transformer
|
Transformer
- Metabolism of Xenobiotics Database
|
|
TRANSPATH
|
TRANSPATH - TRANSPATH
|
|
TransportDB
|
TransportDB - TransportDB
|
|
TRED
|
TRED - Transcriptional Regulatory Element Database
|
|
TRIP
|
TRIP - Mammalian Transient
Receptor Potential Channel-Interacting Protein
|
|
TRMP
|
TRMP -
Therapeutically Relevant Multiple Pathways Database
|
|
TRRD
|
TRRD -
Transcription Regulatory Regions Database
|
|
TRRUST
|
TRRUST -
Transcriptional Regulatory Relationships Unraveled by Sentence-based Text
mining
|
|
TrSDB
|
TrSDB - A
Proteome Database of Transcription Factors
|
|
Trypanocyc
|
Trypanocyc - The
Pathway/Genome Database of Trypanosoma brucei
|
|
TTD
|
TTD -
Therapeutic Targets Database
|
|
UbiNet
|
UbiNet - a web
resource for exploring Ubiquitination Networks
|
|
Ulysses
|
Ulysses - Projection of
Protein Networks across Species
|
|
UM
|
UM-BBD -
Biocatalysis/Biodegradation Database
|
|
UniHI
|
UniHI - Unified Human
Interactome
|
|
UniPathway
|
UniPathway
- UniPathway: a resource for the exploration of metabolic pathways
|
|
UniPROBE
|
UniPROBE -
Universal Protein Binding Microarray Resource for Oligonucleotide Binding
Evaluation
|
|
ValidNESs
|
ValidNESs - Validated
NES-containing proteins, functional NES sites and NES predictions
|
|
VHLdb
|
VHLdb - a database of pVHL
interactions and mutations
|
|
ViRBase
|
ViRBase -
Virus-Host ncRNA Interaction Database
|
|
VirHostNet
|
VirHostNet - Virus-Host
Network
|
|
VIRmiRNA
|
VIRmiRNA -
Resource for Experimental Viral miRNA and their Targets
|
|
Virus Mentha
|
Virus Mentha - The
Viral Interactomes Browser
|
|
VirusMINT
|
VirusMINT
- VirusMINT
|
|
WholeCellKB
|
WholeCellKB - WholeCellKB:
Mycoplasma Genitalium Database
|
|
WikiPathways
|
WikiPathways
- WikiPathways
|
|
Wiki
|
Wiki-Pi -
Wiki-Pi: a wiki resource centred on human protein-protein interactions
|
|
WIT
|
WIT - What Is There?
|
|
WITHDRAWN
|
WITHDRAWN - A
Resource for Withdrawn and Discontinuous Drugs
|
|
Wnt Database
|
Wnt
Database - The Wnt Database
|
|
WormBase
|
WormBase - Worm Base
|
|
WormPD
|
WormPD - Caenorhabditis elegans Proteome Database
|
|
XooNET
|
XooNET -
Integrated Protein-Protein Interaction database of Xanthomonas oryzae
pathovar oryzae KACC1031
|
|
XPD
|
XPD -
Phosphorylation Site Database
|
|
XTalkDB
|
XTalkDB -
|
|
yApoptosis
|
yApoptosis -
yeast apoptosis database
|
|
Yeast KID
|
Yeast KID -
Yeast Kinase Interaction Database
|
|
yeastnet
|
yeastnet - A Consensus
Reconstruction of Yeast Metabolism
|
|
YeastNet
|
YeastNet -
Probabilistic Functional Gene Network of Saccharomyces cerevisiae
|
|
YEASTRACT
|
YEASTRACT - YEAst Search for
Transcriptional Regulators And Consensus Tracking
|
|
YMDB
|
YMDB - The Yeast Metabolome
Database
|
|
YPA
|
YPA - Yeast
Promoter Atlas
|
|
YPD
|
YPD - Yeast Proteome Database
|
|
YTRP
|
YTRP - Yeast
Transcriptional Regulatory Pathway Database
|
|
YY1TargetDB
|
YY1TargetDB - Yin
Yang 1 Target Database
|